BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D04LP1|AL429559
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1478 1732 0.0
>3x_Contig1478
Length = 9651
Score = 1732 bits (873), Expect = 0.0
Identities = 890/894 (99%), Gaps = 2/894 (0%)
Strand = Plus / Minus
Query: 1 actcccctagatatttcgataacattagaaaagcgttas-tgcaggcttctttatgcagg 59
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5079 actcccctagatatttcgataacattagaaaagcgttagctgcaggcttctttatgcagg 5020
Query: 60 tcgcaaaaaaacgatctggcggaaaaggttatatcacagtcaaagataaccaagatgttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5019 tcgcaaaaaaacgatctggcggaaaaggttatatcacagtcaaagataaccaagatgttt 4960
Query: 120 tgatacatccttcaactgttttgggccatgatgccgaatgggttgtatacaatgaattcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4959 tgatacatccttcaactgttttgggccatgatgccgaatgggttgtatacaatgaattcg 4900
Query: 180 ttctaacctccaaaaactacattagaactgtaacatcagttagacctgaatggttaatag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4899 ttctaacctccaaaaactacattagaactgtaacatcagttagacctgaatggttaatag 4840
Query: 240 aattagcaccagcttattatgacctcgatcacttccaaaaaggtgacattaaactatcgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4839 aattagcaccagcttattatgacctcgatcacttccaaaaaggtgacattaaactatcgt 4780
Query: 300 tagaaagggtaaagcaaaagctcgataaaatggtggagctacaacaagaaaaaaaaaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4779 tagaaagggtaaagcaaaagctcgataaaatggtggagctacaacaagaaaaaaaaaaaa 4720
Query: 360 gtgcgaaatctaaaaagtctaagaaataaccaagcatatagatgtgtaacttatataata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4719 gtgcgaaatctaaaaagtctaagaaataaccaagcatatagatgtgtaacttatataata 4660
Query: 420 agattaaccttagaatcagcatgataagtcttattgtagaagtattgtgcggtattatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4659 agattaaccttagaatcagcatgataagtcttattgtagaagtattgtgcggtattatta 4600
Query: 480 gcacgcgactcaaagtctacgttttttttgctgcattttattgaaattcggtatggtgta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4599 gcacgcgactcaaagtctacgttttttttgctgcattttattgaaattcggtatggtgta 4540
Query: 540 cgttttatattcaacccataagaacttcgcttatgatatttcagtgtaaaanatataaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4539 cgttttatattcaacccataagaacttcgcttatgatatttcagtgtaaaaaatataaaa 4480
Query: 600 tcaaatctctaggagtggtttcattgcaatggcgcatatagtatctgtgttgcatatttt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4479 tcaaatctctaggagtggtttcattgcaatggcgcatatagtatctgtgttgcatatttt 4420
Query: 660 cttttgtatctaacgatgctagcaacacataaagtattatgtttaatagaagacgttgct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4419 cttttgtatctaacgatgctagcaacacataaagtattatgtttaatagaagacgttgct 4360
Query: 720 aaatgattaagaacgacgtggttaggaattggcaacgcacctgaattattttcactacct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4359 aaatgattaagaacgacgtggttaggaattggcaacgcacctgaattattttcactacct 4300
Query: 780 ggttcagcatttttgttgtaattattgagaataacattctccaactgaggtggaagttgt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4299 ggttcagcatttttgttgtaattattgagaataacattctccaactgaggtggaagttgt 4240
Query: 840 ggaggag-taaccatgacatattttgttgattgttctgttgctggtctaatgtg 892
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4239 ggaggagttaaccatgacatattttgttgattgttctgttgctggtctaatgtg 4186
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,215
Number of Sequences: 1807
Number of extensions: 13215
Number of successful extensions: 123
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)